Examples on how to use refineGEMs
[1]:
# imports
import refinegems as rg
You can load models
[2]:
model = rg.io.load_model_cobra('../../data/e_coli_core.xml')
[5]:
rg.investigate.get_egc(model)
[5]:
| BOF | objective value | |
|---|---|---|
| 0 | ATP | 0.0 |
| 1 | NADH | 0.0 |
| 2 | NADPH | 0.0 |
| 3 | Q8H2 | 0.0 |
| 4 | ACCOA | 0.0 |
| 5 | GLU | 0.0 |
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