SBOannotator with refineGEMs

refineGEMs provides a connection to the SBOannotator[1] to annotate a model with SBO terms.

Warning

The back-end of this function (run_SBOannotator()) is under heavy construction, but it should still work for the user.

The functionality can be called as follows:

1# model is the model loaded with libSBML
2from refinegems.utility.connections import run_SBOannotator
3
4model_with_sbo = run_SBOannotator(model)