Chemically Defined Medium as described in Wegkamp et al. 2010 (CDMW10)
The CDMW10 medium is a chemically defined medium that is described by Wegkamp et al.[1]. The following in silico definition contains all components as described in ‘Development of a minimal growth medium for Lactobacillus plantarum’[1] (Table 1).
name |
source |
|---|---|
2-Oxidopropane-1,2,3-tricarboxylate [Citrate] |
Ammonium citrate |
3-[(2R)-2,4-Dihydroxy-3,3-dimethylbutanamido]propanoate [Pantothenate] |
Panthothenic acid |
4,5-Bis(hydroxymethyl)-2-methylpyridin-3-ol [Pyridoxine] |
Pyridoxine |
4-(Azaniumylmethyl)-3-hydroxy-5-(hydroxymethyl)-2-methylpyridin-1-ium [Pyridoxamine] |
Pyridoxamine |
4-Aminobenzoic acid |
Para-aminobenzoic acid |
5-(1,2-Dithiolan-3-yl)pentanoate [Lipoate] |
6,8-thiotic acid |
Acetate [Acetic acid] |
Sodium acetate |
Adenine |
Adenine |
Ammonia |
Ammonium citrate |
Biotin |
Biotin |
Calcium(II) cation [Ca(2+)] |
CaCl2 |
Chloride [Cl(-)] |
MgCl2 |
Cobalt(II) cation [Co(2+)] |
CoSO4 |
Copper(II) cation [Cu(2+)] |
CuSO4 |
D-Alanine |
Alanine |
D-Glucose |
Glucose |
D-Serine |
Serine |
Glycine |
Glycine |
Hydrogen [H(+)] |
Water,(NH4)6Mo7O24 |
Inosine |
Inosine |
Iron(II) cation [Fe(2+)] |
FeCl2 |
Iron(III) cation [Fe(3+)] |
FeCl3 |
L-Alanine |
Alanine |
L-Arginine |
Arginine |
L-Ascorbate [Ascorbic acid] |
Ascorbic acid |
L-Aspartate |
Aspartic acid |
L-Cysteine |
Cysteine |
L-Glutamate |
Glutamate |
L-Histidine |
Histidine |
L-Isoleucine |
Isoleucine |
L-Leucine |
Leucine |
L-Lysine |
Lysine |
L-Methionine |
Methionine |
L-Phenylalanine |
Phenylalanine |
L-Proline |
Proline |
L-Serine |
Serine |
L-Threonine |
Threonine |
L-Tryptophan |
Tryptophan |
L-Tyrosine |
Tyrosine |
L-Valine |
Valine |
Magnesium(II) cation [Mg(2+)] |
MgCl2 |
Manganese(II) cation [Mn(2+)] |
MnCl2 |
Orotate [Orotic acid] |
Orotic acid |
Phosphate [PO4(3-)] |
Phosphate |
Potassium(I) cation [K(+)] |
From buffer |
Pyridine-3-carboxylate [Niacin] |
Nicotinic acid |
Riboflavin |
Riboflavin |
Sodium(I) cation [Na(+)] |
Sodium acetate |
Sulfate [SO4(2-)] |
ZnSO4 |
Tetraoxidomolybdate(VI) [Molybdate] |
(NH4)6Mo7O24 |
Thiamine |
Thiamine |
Thymidine |
Thymidine |
Uracil |
Uracil |
Vitamin B12 |
Vitamin B12 |
Water [H2O] |
Water,(NH4)6Mo7O24 |
Zinc(II) cation [Zn(2+)] |
ZnSO4 |
2-amino-1,9-dihydro-6H-purin-6-one [Guanine] |
Guanine |
3,7-Dihydro-1H-purine-2,6-dione [Xanthine] |
Xanthine |